Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847283.1_cds_XP_016509988.1_22875
CDS Infomation

[gene=LOC107827380] [db_xref=GeneID:107827380] [protein=uncharacterized protein LOC107827380 isoform X3] [protein_id=XP_016509988.1] [location=join(14869..15141,15400..15477,22099..22617,22708..22779,22939..23041,29559..29659,29750..29924,30524..30694,30782..30885,31111..31173)] [gbkey=CDS]
Sequence

ATGGTTATGGTGATTCAATACAGTATTGGCCGATCGGCAATACAAATTGCCTCTGCCTTC
CGCCATTGCCACATTTCTTATCATCTGGCATGTTGTGTGAGAGTGATGAGAGCTTTCTCG
ACTGCAACAGAAAACAGCAGCAGCAGCGGCGCTCATTATAATAATAAGGTGTCGAATAAG
CCACCAATATGCACCGCCGACGAGCTCCACTACGTCTCCCTTAATGCTTCTGATTGGAGA
CTTGCTCTCTGGCGCTACCTTCCCCCTCCCCAGGCTCCAAGGAGAAATCATCCGCTTCTT
CTGTTGTCAGGCGTAGGGACTAATGCCATTGGATATGATCTTTCGCCTGAGTCATCATTT
GCTCGGTACATGTGTAATCAAGGATTTGATACTTGGATTCTTGAAGTTCGTGGGACTGGG
TTGAGCGTGCAGGAATCGGATTCCAAAAATATTGAGAAGTCTGCGCACACAGCATCTAAT
GAGATGGAAGCTGCCACTGATAATGCTAATGACAGAGGTCTTTCTGCATCACAGCAGTCC
ACAGATGTCCAGGGCGCCTCAGAAAAGCATGATGCAGCCTTGGTCAAAGAAGAGCCCACT
GTGGTTTCAACAGTATGGGATGAGTCACGAGTGGTGGCTAAACTTACAGACGCTTTTATG
CGCTTGTCAGAGAGAGTCTCTGGCTTTGTCAGTGGAAGTCAGTCGAAGATTGTCTCTGCT
AAACTTGTTCATCAAATATCAAAATTATTGGAGGATTCTTTCCTTTACAAACGGGTTAAC
GCAATAAGGAAGAAATTGTTAAGTCTGCTCGAGACGAGGGAGAACTCAGCTGTCCTCACT
AGCCAAGTCGGGGAACTGAGCAAAAAGCTAGAACAGGTTGACTTAATCCTCAAGTATGAT
TGGGACTTTGATCATTACCTGGAAGAGGATGTCCCTGCTGCGATGGAATATATAAAGGTC
CAAACTAGACCAAAGGATGATAAACTACTCGCAATTGGACATTCTATGGGAGGAATATTA
CTGTATGCCAGGCTATCACGGTGTGGTTTGGAAGGGAGAGAGCCTGGATTAGCTGCTGTT
GTTACTTTGGCTTCATCACTTGATTACACATCATCTAAGTCCGCACTCAAACTGCTTCTA
CCCCTTGCTGATCCTGCTCAGGTTCTCAACGTTCCTGTCATTCCTCTACGGACATTACTG
GCTGCTGCTTATCCTCTTTCATCTCGCGCTCCTTATGTCTTGGCTTGGCTTAATGAAATG
ATATCTGCCACAGACATGATGCATCCAGACTCGCTGAAAAAGCTTGTGCAGAACAGCTTT
TGCAATATTCCTGCTAAACTTCTTTTGCAGTTGGCTACAGCTTTTCAGGAGCAAGGGCTC
CGTGATAGAAGTGGTAAAATTTACTACAAGGATCACCTTCACAAAAGTAGTGTGCCTGTC
TTGGCTCTTGCTGGAGATCTAGACCAGATCTGCCCACCGGAAGCTGTATATGCAGAAACG
GTGAAGCTTATTCCTGAGAACTTGGTGAACTACAAAGTGTTTGGGGATGCTGATGGTCCA
CATTATGCTCATTATGACTTGGTGGGAGGACACATGGCAACAGAACAATTGTATCCCTGC
ATAGTCCAATTTTTAAGCCGATATGATGGGACAAGCTAG

Peptide Sequence

PEP ID

XP_016509988.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107827380 isoform X3 [Nicotiana tabacum]
Sequence

MVMVIQYSIGRSAIQIASAFRHCHISYHLACCVRVMRAFSTATENSSSSGAHYNNKVSNK
PPICTADELHYVSLNASDWRLALWRYLPPPQAPRRNHPLLLLSGVGTNAIGYDLSPESSF
ARYMCNQGFDTWILEVRGTGLSVQESDSKNIEKSAHTASNEMEAATDNANDRGLSASQQS
TDVQGASEKHDAALVKEEPTVVSTVWDESRVVAKLTDAFMRLSERVSGFVSGSQSKIVSA
KLVHQISKLLEDSFLYKRVNAIRKKLLSLLETRENSAVLTSQVGELSKKLEQVDLILKYD
WDFDHYLEEDVPAAMEYIKVQTRPKDDKLLAIGHSMGGILLYARLSRCGLEGREPGLAAV
VTLASSLDYTSSKSALKLLLPLADPAQVLNVPVIPLRTLLAAAYPLSSRAPYVLAWLNEM
ISATDMMHPDSLKKLVQNSFCNIPAKLLLQLATAFQEQGLRDRSGKIYYKDHLHKSSVPV
LALAGDLDQICPPEAVYAETVKLIPENLVNYKVFGDADGPHYAHYDLVGGHMATEQLYPC
IVQFLSRYDGTS

Transcript Sequence

Gene sequence data has not been registered.